BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C02LP1|AL429533
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1434 1714 0.0
>3x_Contig1434
Length = 8845
Score = 1714 bits (855), Expect = 0.0
Identities = 873/889 (98%)
Strand = Plus / Plus
Query: 1 gatccaaaaccaaccagattattctctwtagaccgtgtcttccgtaatgaagctgttgac 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 6671 gatccaaaaccaaccagattattctcgatagaccgtgtcttccgtaatgaagctgttgac 6730
Query: 61 gctacacatttagccgaattccaccaagttgaaggtgttttagctgattacmatataacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6731 gctacacatttagccgaattccaccaagttgaaggtgttttagctgattacaatataacg 6790
Query: 121 ttgggtgacttaatccaattcatggaagacttcttcgctaagatgggtgttacggggttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6791 ttgggtgacttaatccaattcatggaagacttcttcgctaagatgggtgttacggggttg 6850
Query: 181 cgtttcaaaccaacctataacccatacacggaaccttcattggaaatttattcatggcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6851 cgtttcaaaccaacctataacccatacacggaaccttcattggaaatttattcatggcat 6910
Query: 241 gaagggttaggcaaatgggttgagattggtaactccggtatgttcagaccagaaatgttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6911 gaagggttaggcaaatgggttgagattggtaactccggtatgttcagaccagaaatgttg 6970
Query: 301 gaatccatgggccttccaaaggatatgasagttctgggttggggtttgtctttagagaga 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 6971 gaatccatgggccttccaaaggatatgagagttctgggttggggtttgtctttagagaga 7030
Query: 361 cctacaatgattaamtacaaggttcaamatattagasagcttttgggtcacaaggtttct 420
|||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 7031 cctacaatgattaaatacaaggttcaaaatattagagagcttttgggtcacaaggtttct 7090
Query: 421 ttggatttcattgaatcgaaccctgccgctaggttagatgaagatttgtatgamtgattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 7091 ttggatttcattgaatcgaaccctgccgctaggttagatgaagatttgtatgaatgattt 7150
Query: 481 tccttgattgttctaaattgcttttggtagtttatmamatctatatatgcgcttcatatc 540
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 7151 tccttgattgttctaaattgcttttggtagtttataaaatctatatatgcgcttcatatc 7210
Query: 541 ttcaaatcacctgtcagatagtaatctatacagactacctttccgttgtttccaatgctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7211 ttcaaatcacctgtcagatagtaatctatacagactacctttccgttgtttccaatgctc 7270
Query: 601 aaatatgttgtcactaamatccaaatctccatatcgattagtagtagtggaaasatgtac 660
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 7271 aaatatgttgtcactaaaatccaaatctccatatcgattagtagtagtggaaagatgtac 7330
Query: 661 ttgtsattttsttaatgtttcgcaatgamacctaagamtgtcttcctggctggtaatagg 720
|||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 7331 ttgtgattttgttaatgtttcgcaatgaaacctaagaatgtcttcctggctggtaatagg 7390
Query: 721 tcgagctagttgcccattatttatgtgttgctgcttgatcagcttccagtattgtccagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7391 tcgagctagttgcccattatttatgtgttgctgcttgatcagcttccagtattgtccagc 7450
Query: 781 tagcgattgatgtcttatcgcaccattatttttgagttcatcctttgtggctcgtagcat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7451 tagcgattgatgtcttatcgcaccattatttttgagttcatcctttgtggctcgtagcat 7510
Query: 841 ttgcttcggtaagtctgcataaccattacgaagctgccattccaaatct 889
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7511 ttgcttcggtaagtctgcataaccattacgaagctgccattccaaatct 7559
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4936
Number of Sequences: 1807
Number of extensions: 4936
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)